Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav5d-4Q5R1F6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Mir1982-201ENSMUST00000157368 74 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm27243-201ENSMUST00000183964 521 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm37008-201ENSMUST00000195712 319 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm6007-201ENSMUST00000208170 823 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms