Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm18473-201ENSMUST00000220543 868 ntBASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm24231-201ENSMUST00000104315 133 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mir8102-201ENSMUST00000184148 139 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm27702-201ENSMUST00000184512 56 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm7730-201ENSMUST00000212486 454 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.62□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trav15-1-dv6-1Q5R1D2 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms