Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm42432-201ENSMUST00000197902 1617 ntBASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Spg11Q3UHA3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Spg11Q3UHA3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Spg11Q3UHA3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Spg11Q3UHA3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 AA623943-201ENSMUST00000121794 354 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Mir1905-201ENSMUST00000122779 82 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm6606-201ENSMUST00000193613 947 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm44814-201ENSMUST00000207018 434 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm13445-201ENSMUST00000121664 307 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Gm2448-201ENSMUST00000207080 559 ntBASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Spg11Q3UHA3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Spg11Q3UHA3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms