Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
SgcaP82350 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.39□□□□□ -0.75
SgcaP82350 Gm11978-201ENSMUST00000122315 466 ntBASIC10.39□□□□□ -0.75
SgcaP82350 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SgcaP82350 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.39□□□□□ -0.75
SgcaP82350 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.39□□□□□ -0.75
SgcaP82350 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.39□□□□□ -0.75
SgcaP82350 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.39□□□□□ -0.75
SgcaP82350 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gm7775-201ENSMUST00000218871 853 ntBASIC10.39□□□□□ -0.75
SgcaP82350 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.39□□□□□ -0.75
SgcaP82350 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.39□□□□□ -0.75
SgcaP82350 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.39□□□□□ -0.75
SgcaP82350 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SgcaP82350 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.39□□□□□ -0.75
SgcaP82350 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.38□□□□□ -0.75
SgcaP82350 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.38□□□□□ -0.75
SgcaP82350 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SgcaP82350 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SgcaP82350 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Gm35960-201ENSMUST00000202712 767 ntBASIC10.38□□□□□ -0.75
SgcaP82350 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SgcaP82350 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.38□□□□□ -0.75
SgcaP82350 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcaP82350 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcaP82350 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcaP82350 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.37□□□□□ -0.75
SgcaP82350 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcaP82350 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms