Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Matn2-203ENSMUST00000226766 3252 ntBASIC10.34□□□□□ -0.75
Pdlim4P70271 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.34□□□□□ -0.75
Pdlim4P70271 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pdlim4P70271 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.33□□□□□ -0.76
Pdlim4P70271 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Mospd4-201ENSMUST00000180618 576 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm37489-201ENSMUST00000191883 159 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.33□□□□□ -0.76
Pdlim4P70271 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm10608-202ENSMUST00000213924 676 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm7399-201ENSMUST00000032395 858 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.33□□□□□ -0.76
Pdlim4P70271 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pdlim4P70271 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pdlim4P70271 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.33□□□□□ -0.76
Pdlim4P70271 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm11793-201ENSMUST00000120433 981 ntBASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm29396-201ENSMUST00000185659 716 ntBASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm44405-201ENSMUST00000198952 126 ntBASIC10.32□□□□□ -0.76
Pdlim4P70271 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm45930-201ENSMUST00000221330 292 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms