Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm8062-201ENSMUST00000139696 444 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm43818-201ENSMUST00000200605 466 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm43630-201ENSMUST00000201550 776 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Cog3-203ENSMUST00000227473 4197 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.93□□□□□ -0.66
Sec61a1P61620 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61a1P61620 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Sec61a1P61620 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm11618-201ENSMUST00000117946 267 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Snora78-201ENSMUST00000158630 128 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm4271-201ENSMUST00000174444 973 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.92□□□□□ -0.66
Sec61a1P61620 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sec61a1P61620 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61a1P61620 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 1440 ms