Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdh11P55288 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdh11P55288 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.3□□□□□ -0.6
Cdh11P55288 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm13813-201ENSMUST00000120998 787 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Gm13123-201ENSMUST00000122173 492 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm27390-201ENSMUST00000184516 176 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm6013-201ENSMUST00000212264 699 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdh11P55288 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm26035-201ENSMUST00000083065 308 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Olfr582-201ENSMUST00000098212 960 ntBASIC11.3□□□□□ -0.6
Cdh11P55288 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh11P55288 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdh11P55288 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cdh11P55288 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cdh11P55288 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cdh11P55288 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdh11P55288 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Cdh11P55288 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Cdh11P55288 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm23931-201ENSMUST00000103842 109 ntBASIC11.29□□□□□ -0.6
Cdh11P55288 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.29□□□□□ -0.6
Cdh11P55288 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh11P55288 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.29□□□□□ -0.6
Cdh11P55288 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm7399-201ENSMUST00000032395 858 ntBASIC11.29□□□□□ -0.6
Cdh11P55288 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.29□□□□□ -0.6
Cdh11P55288 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Cdh11P55288 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cdh11P55288 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cdh11P55288 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.28□□□□□ -0.6
Cdh11P55288 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms