Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ercc3P49135 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.71□□□□□ -0.06
Ercc3P49135 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.71□□□□□ -0.06
Ercc3P49135 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ercc3P49135 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ercc3P49135 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ercc3P49135 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.71□□□□□ -0.06
Ercc3P49135 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ercc3P49135 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Ercc3P49135 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ercc3P49135 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Ercc3P49135 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm13570-201ENSMUST00000140763 309 ntBASIC14.7□□□□□ -0.06
Ercc3P49135 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm18304-201ENSMUST00000189162 546 ntBASIC14.7□□□□□ -0.06
Ercc3P49135 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm8712-201ENSMUST00000221090 701 ntBASIC14.7□□□□□ -0.06
Ercc3P49135 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ercc3P49135 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.7□□□□□ -0.06
Ercc3P49135 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.7□□□□□ -0.06
Ercc3P49135 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ercc3P49135 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.7□□□□□ -0.06
Ercc3P49135 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.69□□□□□ -0.06
Ercc3P49135 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Gm12314-201ENSMUST00000118104 538 ntBASIC14.69□□□□□ -0.06
Ercc3P49135 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ercc3P49135 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ercc3P49135 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.69□□□□□ -0.06
Ercc3P49135 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.69□□□□□ -0.06
Ercc3P49135 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.69□□□□□ -0.06
Ercc3P49135 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ercc3P49135 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ercc3P49135 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Ercc3P49135 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ercc3P49135 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.68□□□□□ -0.06
Ercc3P49135 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.68□□□□□ -0.06
Ercc3P49135 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ercc3P49135 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ercc3P49135 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.68□□□□□ -0.06
Ercc3P49135 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm14832-201ENSMUST00000121289 322 ntBASIC14.68□□□□□ -0.06
Ercc3P49135 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.68□□□□□ -0.06
Ercc3P49135 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ercc3P49135 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.68□□□□□ -0.06
Ercc3P49135 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ercc3P49135 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ercc3P49135 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms