Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.7□□□□□ -0.38
Cxcl12P40224 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cxcl12P40224 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cxcl12P40224 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm25063-201ENSMUST00000104666 94 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm12948-201ENSMUST00000119406 682 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm4862-201ENSMUST00000170405 438 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm42779-201ENSMUST00000198807 406 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm19640-201ENSMUST00000214849 464 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.69□□□□□ -0.38
Cxcl12P40224 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.69□□□□□ -0.38
Cxcl12P40224 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cxcl12P40224 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cxcl12P40224 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.68□□□□□ -0.38
Cxcl12P40224 Gm11836-201ENSMUST00000121022 441 ntBASIC12.68□□□□□ -0.38
Cxcl12P40224 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Gm8531-201ENSMUST00000188319 893 ntBASIC12.68□□□□□ -0.38
Cxcl12P40224 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cxcl12P40224 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cxcl12P40224 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cxcl12P40224 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl12P40224 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms