Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm37448-201ENSMUST00000192795 697 ntBASIC18.37■□□□□ 0.53
NclP09405 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm19994-201ENSMUST00000217086 586 ntBASIC18.37■□□□□ 0.53
NclP09405 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 AC154252.2-201ENSMUST00000223593 767 ntBASIC18.37■□□□□ 0.53
NclP09405 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NclP09405 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC18.37■□□□□ 0.53
NclP09405 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 Gm6210-201ENSMUST00000204734 1942 ntBASIC18.37■□□□□ 0.53
NclP09405 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC18.37■□□□□ 0.53
NclP09405 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NclP09405 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NclP09405 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NclP09405 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC18.36■□□□□ 0.53
NclP09405 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC18.36■□□□□ 0.53
NclP09405 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC18.36■□□□□ 0.53
NclP09405 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC18.36■□□□□ 0.53
NclP09405 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC18.36■□□□□ 0.53
NclP09405 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Abhd11os-203ENSMUST00000222613 363 ntBASIC18.36■□□□□ 0.53
NclP09405 Zkscan3-207ENSMUST00000223831 2101 ntBASIC18.36■□□□□ 0.53
NclP09405 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.36■□□□□ 0.53
NclP09405 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NclP09405 Gm26035-201ENSMUST00000083065 308 ntBASIC18.36■□□□□ 0.53
NclP09405 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
NclP09405 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NclP09405 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC18.35■□□□□ 0.53
NclP09405 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NclP09405 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
NclP09405 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NclP09405 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC18.35■□□□□ 0.53
NclP09405 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.35■□□□□ 0.53
NclP09405 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC18.35■□□□□ 0.53
NclP09405 Gm37666-201ENSMUST00000194110 866 ntBASIC18.35■□□□□ 0.53
NclP09405 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NclP09405 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NclP09405 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC18.35■□□□□ 0.53
NclP09405 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC18.35■□□□□ 0.53
NclP09405 Gm20633-201ENSMUST00000176742 2831 ntBASIC18.35■□□□□ 0.53
NclP09405 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NclP09405 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
NclP09405 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
NclP09405 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC18.34■□□□□ 0.53
NclP09405 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NclP09405 Gm16481-201ENSMUST00000119074 1227 ntBASIC18.34■□□□□ 0.53
NclP09405 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC18.34■□□□□ 0.53
NclP09405 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NclP09405 B9d1os-201ENSMUST00000137010 674 ntBASIC18.34■□□□□ 0.53
NclP09405 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms