Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm24830-201ENSMUST00000102024 166 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm8018-201ENSMUST00000173536 789 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm25890-201ENSMUST00000177643 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm22614-201ENSMUST00000178300 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm2383-201ENSMUST00000181461 807 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm45925-201ENSMUST00000218882 744 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm22042-201ENSMUST00000082989 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm26232-201ENSMUST00000083360 166 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm24136-201ENSMUST00000083374 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm26110-201ENSMUST00000083971 165 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.4□□□□□ -0.74
Hoxa3P02831 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.4□□□□□ -0.74
Hoxa3P02831 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hoxa3P02831 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxa3P02831 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm8885-201ENSMUST00000189382 598 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms