Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.39□□□□□ -0.27
Vti1aO89116 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Vti1aO89116 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm14921-201ENSMUST00000118643 908 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Gm14208-201ENSMUST00000119645 678 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Gm12566-201ENSMUST00000121479 359 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.39□□□□□ -0.27
Vti1aO89116 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Vti1aO89116 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
Vti1aO89116 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.39□□□□□ -0.27
Vti1aO89116 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.39□□□□□ -0.27
Vti1aO89116 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Vti1aO89116 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.39□□□□□ -0.27
Vti1aO89116 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Vti1aO89116 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Vti1aO89116 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Vti1aO89116 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.38□□□□□ -0.27
Vti1aO89116 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Vti1aO89116 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Vti1aO89116 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.38□□□□□ -0.27
Vti1aO89116 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.38□□□□□ -0.27
Vti1aO89116 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Vti1aO89116 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Vti1aO89116 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vti1aO89116 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vti1aO89116 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Gm13736-201ENSMUST00000119272 253 ntBASIC13.37□□□□□ -0.27
Vti1aO89116 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.37□□□□□ -0.27
Vti1aO89116 Gm12176-201ENSMUST00000121420 875 ntBASIC13.37□□□□□ -0.27
Vti1aO89116 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vti1aO89116 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Vti1aO89116 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.37□□□□□ -0.27
Vti1aO89116 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vti1aO89116 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vti1aO89116 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms