Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.42□□□□□ -0.58
Cops4O88544 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.42□□□□□ -0.58
Cops4O88544 Gm6152-201ENSMUST00000151704 340 ntBASIC11.42□□□□□ -0.58
Cops4O88544 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.42□□□□□ -0.58
Cops4O88544 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.42□□□□□ -0.58
Cops4O88544 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.42□□□□□ -0.58
Cops4O88544 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.42□□□□□ -0.58
Cops4O88544 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cops4O88544 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cops4O88544 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cops4O88544 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.41□□□□□ -0.58
Cops4O88544 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.41□□□□□ -0.58
Cops4O88544 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.41□□□□□ -0.58
Cops4O88544 Gm14350-201ENSMUST00000116642 640 ntBASIC11.41□□□□□ -0.58
Cops4O88544 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.41□□□□□ -0.58
Cops4O88544 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.41□□□□□ -0.58
Cops4O88544 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.41□□□□□ -0.58
Cops4O88544 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.41□□□□□ -0.58
Cops4O88544 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.41□□□□□ -0.58
Cops4O88544 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.41□□□□□ -0.58
Cops4O88544 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cops4O88544 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.41□□□□□ -0.58
Cops4O88544 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.41□□□□□ -0.58
Cops4O88544 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Cops4O88544 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cops4O88544 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cops4O88544 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms