Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf13O54965 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Rnf13O54965 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Gm8213-201ENSMUST00000118191 441 ntBASIC11.21□□□□□ -0.61
Rnf13O54965 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.21□□□□□ -0.61
Rnf13O54965 Gm10156-201ENSMUST00000122364 462 ntBASIC11.21□□□□□ -0.61
Rnf13O54965 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Rnf13O54965 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf13O54965 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.21□□□□□ -0.61
Rnf13O54965 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.21□□□□□ -0.61
Rnf13O54965 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rnf13O54965 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.21□□□□□ -0.61
Rnf13O54965 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf13O54965 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rnf13O54965 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rnf13O54965 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Rnf13O54965 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.21□□□□□ -0.62
Rnf13O54965 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.62
Rnf13O54965 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Rnf13O54965 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.21□□□□□ -0.62
Rnf13O54965 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Rnf13O54965 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Rnf13O54965 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rnf13O54965 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf13O54965 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 Gm2231-201ENSMUST00000125661 612 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 Gm7287-201ENSMUST00000205267 602 ntBASIC11.2□□□□□ -0.62
Rnf13O54965 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf13O54965 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Rnf13O54965 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Rnf13O54965 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf13O54965 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf13O54965 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf13O54965 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.19□□□□□ -0.62
Rnf13O54965 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.19□□□□□ -0.62
Rnf13O54965 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms