Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ebf3O08791 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.9□□□□□ -0.34
Ebf3O08791 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ebf3O08791 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ebf3O08791 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf3O08791 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.89□□□□□ -0.35
Ebf3O08791 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.89□□□□□ -0.35
Ebf3O08791 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ebf3O08791 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm23200-201ENSMUST00000104379 132 ntBASIC12.89□□□□□ -0.35
Ebf3O08791 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ebf3O08791 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ebf3O08791 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.89□□□□□ -0.35
Ebf3O08791 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf3O08791 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf3O08791 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.89□□□□□ -0.35
Ebf3O08791 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm8913-201ENSMUST00000209491 641 ntBASIC12.89□□□□□ -0.35
Ebf3O08791 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.89□□□□□ -0.35
Ebf3O08791 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.89□□□□□ -0.35
Ebf3O08791 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ebf3O08791 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.88□□□□□ -0.35
Ebf3O08791 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Gm13296-201ENSMUST00000117854 997 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Gm9083-201ENSMUST00000120423 819 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Gm14832-201ENSMUST00000121289 322 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Gm24845-201ENSMUST00000158034 109 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.88□□□□□ -0.35
Ebf3O08791 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ebf3O08791 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ebf3O08791 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ebf3O08791 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.87□□□□□ -0.35
Ebf3O08791 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ebf3O08791 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ebf3O08791 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms