Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm18584-201ENSMUST00000203098 964 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdh9F8VPK8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Gm12502-201ENSMUST00000120197 444 ntBASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Gm45925-201ENSMUST00000218882 744 ntBASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms