Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm14892-201ENSMUST00000117636 267 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm8956-201ENSMUST00000203939 825 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm18123-201ENSMUST00000210874 822 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc188F6WEU2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Gm23272-201ENSMUST00000104053 129 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc188F6WEU2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc188F6WEU2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ccdc188F6WEU2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc188F6WEU2 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc188F6WEU2 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.4□□□□□ -0.42
Ccdc188F6WEU2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms