Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh17E9PXF0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm14277-201ENSMUST00000121195 360 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh17E9PXF0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm4909-201ENSMUST00000118749 794 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm13315-201ENSMUST00000120376 991 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm14832-201ENSMUST00000121289 322 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm44262-201ENSMUST00000204969 372 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Gm10312-201ENSMUST00000078515 489 ntBASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh17E9PXF0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms