Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Gm7851-201ENSMUST00000117574 323 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Gm9996-201ENSMUST00000070359 913 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 Snora73b-201ENSMUST00000083419 205 ntBASIC11.1□□□□□ -0.63
Shank1D3YZU1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm13047-201ENSMUST00000117116 815 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm15573-201ENSMUST00000119487 540 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm4482-201ENSMUST00000200876 742 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm6485-201ENSMUST00000160676 439 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm9463-201ENSMUST00000206707 601 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shank1D3YZU1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Shank1D3YZU1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm3332-201ENSMUST00000189337 928 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms