Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Gm12887B1AVM1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm12887B1AVM1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Gm28760-201ENSMUST00000185995 736 ntBASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Gm43416-201ENSMUST00000201916 1015 ntBASIC9.99□□□□□ -0.81
Gm12887B1AVM1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm12887B1AVM1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm5687-201ENSMUST00000118252 640 ntBASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm23363-201ENSMUST00000175024 79 ntBASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm12887B1AVM1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms