Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm5866-201ENSMUST00000177881 973 ntBASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm4034-201ENSMUST00000187674 480 ntBASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm17794-201ENSMUST00000220252 955 ntBASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trbv29A0A0G2LB96 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm8515-201ENSMUST00000194852 576 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trbv29A0A0G2LB96 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms