Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm15703-201ENSMUST00000120250 880 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm24644-201ENSMUST00000157114 139 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm4271-201ENSMUST00000174444 973 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm27847-201ENSMUST00000183711 107 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm27375-201ENSMUST00000183799 107 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm29705-201ENSMUST00000212598 474 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.18□□□□□ -0.62
H2afb3S4R1G7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm27331-201ENSMUST00000183705 60 ntBASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
H2afb3S4R1G7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms