Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm7809-201ENSMUST00000153199 742 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm43133-201ENSMUST00000197472 463 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm43118-201ENSMUST00000199149 775 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm45331-201ENSMUST00000209868 554 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm7399-201ENSMUST00000032395 858 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim3Q9R1R2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim3Q9R1R2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm3890-201ENSMUST00000182416 207 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm42627-201ENSMUST00000197347 224 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.68□□□□□ -0.54
Trim3Q9R1R2 Gm18584-201ENSMUST00000203098 964 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms