Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm6888-201ENSMUST00000221983 706 ntBASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm7775-201ENSMUST00000218871 853 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf4Q9QZS2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf4Q9QZS2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms