Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp4cQ9D7F7 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm12390-201ENSMUST00000117897 397 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm1335-201ENSMUST00000121653 386 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm27682-201ENSMUST00000183930 110 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm38092-201ENSMUST00000195600 653 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm8099-201ENSMUST00000200510 742 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm10268-201ENSMUST00000085340 555 ntBASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chmp4cQ9D7F7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Gm4768-201ENSMUST00000206199 686 ntBASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chmp4cQ9D7F7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Gm6222-202ENSMUST00000182143 629 ntBASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Gm40466-201ENSMUST00000212174 422 ntBASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Chmp4cQ9D7F7 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms