Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.85□□□□□ -0.51
Shmt2Q9CZN7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm23363-201ENSMUST00000175024 79 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Snora73a-201ENSMUST00000082453 205 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm26035-201ENSMUST00000083065 308 ntBASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shmt2Q9CZN7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms