Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm24830-201ENSMUST00000102024 166 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm22709-201ENSMUST00000116893 111 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm3344-201ENSMUST00000169610 603 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm25026-201ENSMUST00000175017 188 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm25890-201ENSMUST00000177643 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm22614-201ENSMUST00000178300 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm27046-201ENSMUST00000182160 463 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm35638-201ENSMUST00000220724 652 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm22042-201ENSMUST00000082989 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm26232-201ENSMUST00000083360 166 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm24136-201ENSMUST00000083374 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm26110-201ENSMUST00000083971 165 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Otud1Q9CUB6 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Paupar-201ENSMUST00000194826 3482 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm28882-201ENSMUST00000185504 314 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm3096-201ENSMUST00000185770 364 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm18304-201ENSMUST00000189162 546 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 AA914427-201ENSMUST00000193194 1166 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm26035-201ENSMUST00000083065 308 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.79□□□□□ -0.52
Otud1Q9CUB6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Otud1Q9CUB6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Otud1Q9CUB6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms