Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm6157-201ENSMUST00000199935 1897 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm13517-201ENSMUST00000120782 1495 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm24158-201ENSMUST00000175263 71 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm9061-201ENSMUST00000182707 1006 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm27494-201ENSMUST00000184735 189 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm17971-201ENSMUST00000190239 806 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39lQ9CQD0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Gm42913-201ENSMUST00000197936 1853 ntBASIC8.02□□□□□ -1.12
Rpl39lQ9CQD0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Gm13365-201ENSMUST00000121188 973 ntBASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Gm3436-201ENSMUST00000179930 840 ntBASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rpl39lQ9CQD0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms