Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm27243-201ENSMUST00000183964 521 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm6007-201ENSMUST00000208170 823 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm12502-201ENSMUST00000120197 444 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm7653-201ENSMUST00000214567 508 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
H2afb1Q9CQ70 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
H2afb1Q9CQ70 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms