Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm13369-201ENSMUST00000119442 987 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm22121-201ENSMUST00000175148 54 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm11803-201ENSMUST00000119966 444 ntBASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.16□□□□□ -0.46
Trim8Q99PJ2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm23363-201ENSMUST00000175024 79 ntBASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.16□□□□□ -0.46
Trim8Q99PJ2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim8Q99PJ2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.15□□□□□ -0.46
Trim8Q99PJ2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms