Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.84□□□□□ -0.35
Cdk5rap3Q99LM2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdk5rap3Q99LM2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.35
Cdk5rap3Q99LM2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdk5rap3Q99LM2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cdk5rap3Q99LM2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.83□□□□□ -0.35
Cdk5rap3Q99LM2 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm26927-201ENSMUST00000182385 965 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm27243-201ENSMUST00000183964 521 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm27839-201ENSMUST00000184242 106 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Gm7561-201ENSMUST00000211203 886 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.83□□□□□ -0.36
Cdk5rap3Q99LM2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms