Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb20Q91XZ9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Acot6-202ENSMUST00000222921 3622 ntBASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb20Q91XZ9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm37424-201ENSMUST00000191727 561 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm19931-201ENSMUST00000198920 368 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Gm44954-201ENSMUST00000208513 227 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 CT025639.2-201ENSMUST00000224440 1220 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 AC121542.1-201ENSMUST00000227245 721 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 AC170810.2-201ENSMUST00000228384 1232 ntBASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb20Q91XZ9 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms