Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Snord83b-201ENSMUST00000104546 94 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga3Q91XY5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Pcdhga3Q91XY5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm13829-201ENSMUST00000119600 138 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm27731-201ENSMUST00000185192 107 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm43433-201ENSMUST00000196573 481 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga3Q91XY5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdhga3Q91XY5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms