Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ddx1Q91VR5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx1Q91VR5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx1Q91VR5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx1Q91VR5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ddx1Q91VR5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm11331-201ENSMUST00000119764 288 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm18304-201ENSMUST00000189162 546 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.83□□□□□ -0.36
Ddx1Q91VR5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ddx1Q91VR5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm12314-201ENSMUST00000118104 538 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm12217-201ENSMUST00000118858 696 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm23119-201ENSMUST00000158610 140 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm44405-201ENSMUST00000198952 126 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm30285-201ENSMUST00000214614 422 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ddx1Q91VR5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 454.8 ms