Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp7Q8R1T1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm7851-201ENSMUST00000117574 323 ntBASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm15131-201ENSMUST00000119124 595 ntBASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp7Q8R1T1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm7722-201ENSMUST00000120646 741 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Rprl1-201ENSMUST00000158050 327 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm37246-201ENSMUST00000192665 835 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Gm4157-201ENSMUST00000211647 679 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp7Q8R1T1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Mir7032-201ENSMUST00000185154 79 ntBASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Gm3332-201ENSMUST00000189337 928 ntBASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Gm44126-201ENSMUST00000204831 514 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms