Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Mir874-201ENSMUST00000104769 76 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Zcchc9Q8R1J3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Zcchc9Q8R1J3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Zcchc9Q8R1J3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms