Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.26□□□□□ -0.45
Ccdc28bQ8CEG5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm15703-201ENSMUST00000120250 880 ntBASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc28bQ8CEG5 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Gm15429-201ENSMUST00000151268 798 ntBASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Mir7654-201ENSMUST00000185082 70 ntBASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc28bQ8CEG5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms