Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.27□□□□□ -0.44
Lrif1Q8CDD9 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lrif1Q8CDD9 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm11425-201ENSMUST00000119608 498 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Snora78-201ENSMUST00000158630 128 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Mir7085-201ENSMUST00000184353 66 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm45784-201ENSMUST00000188360 142 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm9396-201ENSMUST00000076703 567 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lrif1Q8CDD9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gm7561-201ENSMUST00000211203 886 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.25□□□□□ -0.45
Lrif1Q8CDD9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms