Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh3rf2Q8BZT2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Gm27552-201ENSMUST00000183351 62 ntBASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Gm27844-201ENSMUST00000183613 62 ntBASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 AY036118-201ENSMUST00000200021 923 ntBASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sh3rf2Q8BZT2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Gm17040-202ENSMUST00000170597 889 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sh3rf2Q8BZT2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sh3rf2Q8BZT2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms