Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm11793-201ENSMUST00000120433 981 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm27516-201ENSMUST00000184237 98 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Mir6420-201ENSMUST00000185032 102 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cpsf4Q8BQZ5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cpsf4Q8BQZ5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cpsf4Q8BQZ5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm23363-201ENSMUST00000175024 79 ntBASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm18584-201ENSMUST00000203098 964 ntBASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.01□□□□□ -0.49
Cpsf4Q8BQZ5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms