Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm4271-201ENSMUST00000174444 973 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm27331-201ENSMUST00000183705 60 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm29705-201ENSMUST00000212598 474 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm5035-201ENSMUST00000215581 927 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.47□□□□□ -0.41
Usp8Q80U87 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.47□□□□□ -0.41
Usp8Q80U87 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.46□□□□□ -0.41
Usp8Q80U87 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gm27839-201ENSMUST00000184242 106 ntBASIC12.46□□□□□ -0.41
Usp8Q80U87 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.46□□□□□ -0.41
Usp8Q80U87 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.46□□□□□ -0.41
Usp8Q80U87 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
Usp8Q80U87 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Usp8Q80U87 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Usp8Q80U87 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.46□□□□□ -0.42
Usp8Q80U87 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.46□□□□□ -0.42
Usp8Q80U87 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.46□□□□□ -0.42
Usp8Q80U87 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp8Q80U87 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Usp8Q80U87 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Usp8Q80U87 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Usp8Q80U87 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Usp8Q80U87 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm11478-201ENSMUST00000117851 599 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm27847-201ENSMUST00000183711 107 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm27375-201ENSMUST00000183799 107 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm4768-201ENSMUST00000206199 686 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Gm32025-201ENSMUST00000217960 307 ntBASIC12.45□□□□□ -0.42
Usp8Q80U87 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.45□□□□□ -0.42
Usp8Q80U87 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms