Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ctdp1Q7TSG2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ctdp1Q7TSG2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Gm8213-201ENSMUST00000118191 441 ntBASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Gm27847-201ENSMUST00000183711 107 ntBASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Gm27375-201ENSMUST00000183799 107 ntBASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ctdp1Q7TSG2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm8652-201ENSMUST00000181363 964 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.51□□□□□ -0.25
Ctdp1Q7TSG2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ctdp1Q7TSG2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms