Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm14005-208ENSMUST00000223654 681 ntBASIC13.17□□□□□ -0.3
Scube3Q66PY1 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.17□□□□□ -0.3
Scube3Q66PY1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scube3Q66PY1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm11222-201ENSMUST00000119005 738 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm15968-201ENSMUST00000119342 1168 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm14999-201ENSMUST00000121039 624 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm26461-201ENSMUST00000175064 290 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm27243-201ENSMUST00000183964 521 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm7783-201ENSMUST00000204795 781 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm21769-201ENSMUST00000211922 111 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm39404-201ENSMUST00000216350 313 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 AC139323.1-201ENSMUST00000223370 1040 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm10076-201ENSMUST00000073238 384 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm18829-201ENSMUST00000188150 1622 ntBASIC13.16□□□□□ -0.3
Scube3Q66PY1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.16□□□□□ -0.3
Scube3Q66PY1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm24255-201ENSMUST00000104481 128 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm27023-201ENSMUST00000182372 285 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm37857-201ENSMUST00000191784 1199 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scube3Q66PY1 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.15□□□□□ -0.3
Scube3Q66PY1 AC154848.1-201ENSMUST00000225451 846 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms