Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Gm5419-201ENSMUST00000119301 527 ntBASIC11.43□□□□□ -0.58
AtmQ62388 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.43□□□□□ -0.58
AtmQ62388 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
AtmQ62388 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.43□□□□□ -0.58
AtmQ62388 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.43□□□□□ -0.58
AtmQ62388 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
AtmQ62388 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
AtmQ62388 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
AtmQ62388 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Gm38007-201ENSMUST00000192187 313 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
AtmQ62388 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
AtmQ62388 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
AtmQ62388 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
AtmQ62388 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
AtmQ62388 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
AtmQ62388 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.42□□□□□ -0.58
AtmQ62388 Gm8451-201ENSMUST00000170338 447 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
AtmQ62388 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Gm43997-201ENSMUST00000203986 1005 ntBASIC11.42□□□□□ -0.58
AtmQ62388 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Gm5599-201ENSMUST00000209602 788 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
AtmQ62388 Gm7536-201ENSMUST00000077389 444 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Gm5453-201ENSMUST00000080866 447 ntBASIC11.42□□□□□ -0.58
AtmQ62388 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
AtmQ62388 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.42□□□□□ -0.58
AtmQ62388 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
AtmQ62388 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
AtmQ62388 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AtmQ62388 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.41□□□□□ -0.58
AtmQ62388 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
AtmQ62388 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.41□□□□□ -0.58
AtmQ62388 Gm18561-201ENSMUST00000206027 804 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
AtmQ62388 Gm8342-201ENSMUST00000209839 757 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.41□□□□□ -0.58
AtmQ62388 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.41□□□□□ -0.58
AtmQ62388 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.41□□□□□ -0.58
AtmQ62388 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.41□□□□□ -0.58
AtmQ62388 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
AtmQ62388 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms