Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SspnQ62147 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.43□□□□□ -0.74
SspnQ62147 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SspnQ62147 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.43□□□□□ -0.74
SspnQ62147 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SspnQ62147 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
SspnQ62147 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SspnQ62147 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SspnQ62147 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SspnQ62147 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
SspnQ62147 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SspnQ62147 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Gm22121-201ENSMUST00000175148 54 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.42□□□□□ -0.74
SspnQ62147 Gm27331-201ENSMUST00000183705 60 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Gm7653-201ENSMUST00000214567 508 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Gm19163-201ENSMUST00000223313 780 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Gm10012-201ENSMUST00000078252 192 ntBASIC10.42□□□□□ -0.74
SspnQ62147 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
SspnQ62147 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SspnQ62147 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.42□□□□□ -0.74
SspnQ62147 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SspnQ62147 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.41□□□□□ -0.74
SspnQ62147 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SspnQ62147 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.41□□□□□ -0.74
SspnQ62147 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SspnQ62147 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.41□□□□□ -0.74
SspnQ62147 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.41□□□□□ -0.74
SspnQ62147 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Gm4271-201ENSMUST00000174444 973 ntBASIC10.41□□□□□ -0.74
SspnQ62147 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.41□□□□□ -0.74
SspnQ62147 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.41□□□□□ -0.74
SspnQ62147 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
SspnQ62147 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SspnQ62147 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SspnQ62147 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms