Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm16479-201ENSMUST00000121706 932 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm16296-201ENSMUST00000159905 325 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.82□□□□□ -0.52
Nr1h4Q60641 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nr1h4Q60641 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gm24231-201ENSMUST00000104315 133 ntBASIC11.81□□□□□ -0.52
Nr1h4Q60641 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nr1h4Q60641 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Proscos-202ENSMUST00000178990 666 ntBASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gm7287-201ENSMUST00000205267 602 ntBASIC11.81□□□□□ -0.52
Nr1h4Q60641 Gm8598-201ENSMUST00000221184 836 ntBASIC11.81□□□□□ -0.52
Nr1h4Q60641 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.81□□□□□ -0.52
Nr1h4Q60641 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms