Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc88aQ5SNZ0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm3793-201ENSMUST00000204973 672 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm8199-201ENSMUST00000121323 823 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm25881-201ENSMUST00000157783 103 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 AY036118-201ENSMUST00000200021 923 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm45598-202ENSMUST00000210719 986 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm21811-201ENSMUST00000096485 930 ntBASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc88aQ5SNZ0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm27530-201ENSMUST00000184096 98 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm45398-201ENSMUST00000210561 165 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc88aQ5SNZ0 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Gm18038-201ENSMUST00000197900 485 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc88aQ5SNZ0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms