Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav5d-4Q5R1F6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm16379-201ENSMUST00000161469 348 ntBASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm8762-201ENSMUST00000193486 339 ntBASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm44405-201ENSMUST00000198952 126 ntBASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav5d-4Q5R1F6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav5d-4Q5R1F6 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm13315-201ENSMUST00000120376 991 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm8018-201ENSMUST00000173536 789 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm45925-201ENSMUST00000218882 744 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm5781-201ENSMUST00000219792 443 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.64□□□□□ -0.71
Trav5d-4Q5R1F6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms