Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm5449-201ENSMUST00000081132 357 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm12986-201ENSMUST00000119037 967 ntBASIC11.36□□□□□ -0.59
Spg11Q3UHA3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Spg11Q3UHA3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm12345-201ENSMUST00000119288 898 ntBASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm43726-201ENSMUST00000199110 775 ntBASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Spg11Q3UHA3 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Spg11Q3UHA3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms