Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Palb2Q3U0P1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Palb2Q3U0P1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.9□□□□□ -0.19
Palb2Q3U0P1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Palb2Q3U0P1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Palb2Q3U0P1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Palb2Q3U0P1 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Gm45219-201ENSMUST00000205602 465 ntBASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Palb2Q3U0P1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm12015-201ENSMUST00000117065 843 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm15711-201ENSMUST00000118889 535 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm13888-201ENSMUST00000119148 422 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm14832-201ENSMUST00000121289 322 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm8194-201ENSMUST00000159783 859 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm45598-202ENSMUST00000210719 986 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Palb2Q3U0P1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms